STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ39044.1Acyl-CoA dehydrogenase. (411 aa)    
Predicted Functional Partners:
SHJ16397.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
SHJ05109.1
Acyl transferase domain-containing protein.
  
 0.852
SHK27057.1
Electron transfer flavoprotein alpha subunit.
 0.846
SHK37250.1
Electron transfer flavoprotein alpha subunit.
 0.840
SHJ39078.1
Acyl-CoA synthetase (NDP forming).
    
  0.799
SHI55213.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.785
SHJ05860.1
enoyl-CoA hydratase.
   
  0.785
SHI88927.1
3-methylcrotonyl-CoA carboxylase beta subunit.
  
 
 0.757
SHK27094.1
Electron transfer flavoprotein beta subunit.
 
 
 0.753
SHK37279.1
Electron transfer flavoprotein beta subunit.
 
 
 0.753
Your Current Organism:
Roseomonas rosea
NCBI taxonomy Id: 198092
Other names: CIP 107419, DSM 14916, Muricoccus roseus, Muricoccus roseus Kampfer et al. 2003, R. rosea, Roseomonas rosea (Kampfer et al. 2003) Sanchez-Porro et al. 2009, strain 173-96, strain 173/96
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