Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI42298.1 | SHJ45226.1 | SAMN02745194_00319 | SAMN02745194_02595 | PRC-barrel domain-containing protein. | CreA protein. | 0.403 |
SHI80380.1 | SHJ45226.1 | SAMN02745194_01106 | SAMN02745194_02595 | Uncharacterized conserved protein YcbK, DUF882 family. | CreA protein. | 0.465 |
SHI80380.1 | SHJ45323.1 | SAMN02745194_01106 | SAMN02745194_02598 | Uncharacterized conserved protein YcbK, DUF882 family. | Penicillin-insensitive murein endopeptidase. | 0.710 |
SHJ45201.1 | SHJ45226.1 | SAMN02745194_02594 | SAMN02745194_02595 | Hypothetical protein. | CreA protein. | 0.762 |
SHJ45201.1 | SHJ45251.1 | SAMN02745194_02594 | SAMN02745194_02596 | Hypothetical protein. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.604 |
SHJ45201.1 | SHJ45291.1 | SAMN02745194_02594 | SAMN02745194_02597 | Hypothetical protein. | Putative endonuclease; Belongs to the UPF0102 family. | 0.450 |
SHJ45226.1 | SHI42298.1 | SAMN02745194_02595 | SAMN02745194_00319 | CreA protein. | PRC-barrel domain-containing protein. | 0.403 |
SHJ45226.1 | SHI80380.1 | SAMN02745194_02595 | SAMN02745194_01106 | CreA protein. | Uncharacterized conserved protein YcbK, DUF882 family. | 0.465 |
SHJ45226.1 | SHJ45201.1 | SAMN02745194_02595 | SAMN02745194_02594 | CreA protein. | Hypothetical protein. | 0.762 |
SHJ45226.1 | SHJ45251.1 | SAMN02745194_02595 | SAMN02745194_02596 | CreA protein. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.613 |
SHJ45226.1 | SHJ45291.1 | SAMN02745194_02595 | SAMN02745194_02597 | CreA protein. | Putative endonuclease; Belongs to the UPF0102 family. | 0.456 |
SHJ45226.1 | SHJ45323.1 | SAMN02745194_02595 | SAMN02745194_02598 | CreA protein. | Penicillin-insensitive murein endopeptidase. | 0.409 |
SHJ45251.1 | SHJ45201.1 | SAMN02745194_02596 | SAMN02745194_02594 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Hypothetical protein. | 0.604 |
SHJ45251.1 | SHJ45226.1 | SAMN02745194_02596 | SAMN02745194_02595 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | CreA protein. | 0.613 |
SHJ45251.1 | SHJ45291.1 | SAMN02745194_02596 | SAMN02745194_02597 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Putative endonuclease; Belongs to the UPF0102 family. | 0.564 |
SHJ45291.1 | SHJ45201.1 | SAMN02745194_02597 | SAMN02745194_02594 | Putative endonuclease; Belongs to the UPF0102 family. | Hypothetical protein. | 0.450 |
SHJ45291.1 | SHJ45226.1 | SAMN02745194_02597 | SAMN02745194_02595 | Putative endonuclease; Belongs to the UPF0102 family. | CreA protein. | 0.456 |
SHJ45291.1 | SHJ45251.1 | SAMN02745194_02597 | SAMN02745194_02596 | Putative endonuclease; Belongs to the UPF0102 family. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.564 |
SHJ45323.1 | SHI80380.1 | SAMN02745194_02598 | SAMN02745194_01106 | Penicillin-insensitive murein endopeptidase. | Uncharacterized conserved protein YcbK, DUF882 family. | 0.710 |
SHJ45323.1 | SHJ45226.1 | SAMN02745194_02598 | SAMN02745194_02595 | Penicillin-insensitive murein endopeptidase. | CreA protein. | 0.409 |