Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI43059.1 | SHJ10428.1 | SAMN02745194_00341 | SAMN02745194_01785 | DNA-binding transcriptional activator of the SARP family. | Ankyrin repeat-containing protein. | 0.954 |
SHI43059.1 | SHJ70876.1 | SAMN02745194_00341 | SAMN02745194_03187 | DNA-binding transcriptional activator of the SARP family. | Choline dehydrogenase. | 0.872 |
SHI43059.1 | SHJ92239.1 | SAMN02745194_00341 | SAMN02745194_03734 | DNA-binding transcriptional activator of the SARP family. | Putative PEP-CTERM system TPR-repeat lipoprotein. | 0.700 |
SHI43059.1 | SHK13994.1 | SAMN02745194_00341 | SAMN02745194_04276 | DNA-binding transcriptional activator of the SARP family. | WD40 repeat. | 0.964 |
SHI60005.1 | SHJ70876.1 | SAMN02745194_00696 | SAMN02745194_03187 | Nicotinate dehydrogenase subunit B. | Choline dehydrogenase. | 0.916 |
SHI71297.1 | SHJ70876.1 | SAMN02745194_00907 | SAMN02745194_03187 | Cytochrome c, mono-and diheme variants. | Choline dehydrogenase. | 0.875 |
SHI82075.1 | SHJ10428.1 | SAMN02745194_01162 | SAMN02745194_01785 | Hypothetical protein. | Ankyrin repeat-containing protein. | 0.962 |
SHI82075.1 | SHJ70876.1 | SAMN02745194_01162 | SAMN02745194_03187 | Hypothetical protein. | Choline dehydrogenase. | 0.872 |
SHI82075.1 | SHK13994.1 | SAMN02745194_01162 | SAMN02745194_04276 | Hypothetical protein. | WD40 repeat. | 0.959 |
SHJ10428.1 | SHI43059.1 | SAMN02745194_01785 | SAMN02745194_00341 | Ankyrin repeat-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.954 |
SHJ10428.1 | SHI82075.1 | SAMN02745194_01785 | SAMN02745194_01162 | Ankyrin repeat-containing protein. | Hypothetical protein. | 0.962 |
SHJ10428.1 | SHJ70876.1 | SAMN02745194_01785 | SAMN02745194_03187 | Ankyrin repeat-containing protein. | Choline dehydrogenase. | 0.973 |
SHJ10428.1 | SHJ92239.1 | SAMN02745194_01785 | SAMN02745194_03734 | Ankyrin repeat-containing protein. | Putative PEP-CTERM system TPR-repeat lipoprotein. | 0.965 |
SHJ10428.1 | SHK01926.1 | SAMN02745194_01785 | SAMN02745194_03985 | Ankyrin repeat-containing protein. | Glycosyl transferase family 2. | 0.981 |
SHJ10428.1 | SHK13994.1 | SAMN02745194_01785 | SAMN02745194_04276 | Ankyrin repeat-containing protein. | WD40 repeat. | 0.994 |
SHJ10428.1 | SHK39555.1 | SAMN02745194_01785 | SAMN02745194_04833 | Ankyrin repeat-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.978 |
SHJ56358.1 | SHJ70876.1 | SAMN02745194_02840 | SAMN02745194_03187 | Cytochrome c, mono-and diheme variants. | Choline dehydrogenase. | 0.884 |
SHJ70876.1 | SHI43059.1 | SAMN02745194_03187 | SAMN02745194_00341 | Choline dehydrogenase. | DNA-binding transcriptional activator of the SARP family. | 0.872 |
SHJ70876.1 | SHI60005.1 | SAMN02745194_03187 | SAMN02745194_00696 | Choline dehydrogenase. | Nicotinate dehydrogenase subunit B. | 0.916 |
SHJ70876.1 | SHI71297.1 | SAMN02745194_03187 | SAMN02745194_00907 | Choline dehydrogenase. | Cytochrome c, mono-and diheme variants. | 0.875 |
page 1 of 3