Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI32865.1 | SHI68847.1 | SAMN02745194_00035 | SAMN02745194_00836 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.733 |
SHI32865.1 | SHI70424.1 | SAMN02745194_00035 | SAMN02745194_00881 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.863 |
SHI32865.1 | SHI89035.1 | SAMN02745194_00035 | SAMN02745194_01282 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.770 |
SHI32865.1 | SHJ77128.1 | SAMN02745194_00035 | SAMN02745194_03309 | PAS domain S-box-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.863 |
SHI32865.1 | SHJ77184.1 | SAMN02745194_00035 | SAMN02745194_03311 | PAS domain S-box-containing protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.489 |
SHI32865.1 | SHJ77239.1 | SAMN02745194_00035 | SAMN02745194_03313 | PAS domain S-box-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.733 |
SHI32865.1 | SHJ80951.1 | SAMN02745194_00035 | SAMN02745194_03427 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.784 |
SHI32865.1 | SHJ84505.1 | SAMN02745194_00035 | SAMN02745194_03525 | PAS domain S-box-containing protein. | Hpt domain-containing protein. | 0.970 |
SHI32865.1 | SHJ96652.1 | SAMN02745194_00035 | SAMN02745194_03848 | PAS domain S-box-containing protein. | Putative addiction module antidote protein, CC2985 family. | 0.810 |
SHI32865.1 | SHK50094.1 | SAMN02745194_00035 | SAMN02745194_05043 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.854 |
SHI68847.1 | SHI32865.1 | SAMN02745194_00836 | SAMN02745194_00035 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.733 |
SHI68847.1 | SHI70424.1 | SAMN02745194_00836 | SAMN02745194_00881 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.976 |
SHI68847.1 | SHI89035.1 | SAMN02745194_00836 | SAMN02745194_01282 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.779 |
SHI68847.1 | SHJ77128.1 | SAMN02745194_00836 | SAMN02745194_03309 | PAS domain S-box-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.895 |
SHI68847.1 | SHJ77239.1 | SAMN02745194_00836 | SAMN02745194_03313 | PAS domain S-box-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.666 |
SHI68847.1 | SHJ80951.1 | SAMN02745194_00836 | SAMN02745194_03427 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.831 |
SHI68847.1 | SHJ84505.1 | SAMN02745194_00836 | SAMN02745194_03525 | PAS domain S-box-containing protein. | Hpt domain-containing protein. | 0.986 |
SHI68847.1 | SHJ96652.1 | SAMN02745194_00836 | SAMN02745194_03848 | PAS domain S-box-containing protein. | Putative addiction module antidote protein, CC2985 family. | 0.962 |
SHI68847.1 | SHK50094.1 | SAMN02745194_00836 | SAMN02745194_05043 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.880 |
SHI70424.1 | SHI32865.1 | SAMN02745194_00881 | SAMN02745194_00035 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.863 |
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