STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ88964.1Methyl-accepting chemotaxis protein. (112 aa)    
Predicted Functional Partners:
SHI47231.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.991
SHJ80192.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.967
SHI47265.1
Purine-binding chemotaxis protein CheW.
 
 0.946
SHJ84505.1
Hpt domain-containing protein.
  
 0.936
SHK01570.1
PAS domain S-box-containing protein.
  
 0.916
SHK06373.1
PAS domain S-box-containing protein.
  
 0.899
SHK06005.1
Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE.
  
 0.875
SHK06494.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.849
SHK07402.1
HAMP domain-containing protein.
 
     0.839
SHJ77671.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.831
Your Current Organism:
Roseomonas rosea
NCBI taxonomy Id: 198092
Other names: CIP 107419, DSM 14916, Muricoccus roseus, Muricoccus roseus Kampfer et al. 2003, R. rosea, Roseomonas rosea (Kampfer et al. 2003) Sanchez-Porro et al. 2009, strain 173-96, strain 173/96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.