Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHI83760.1 | SHJ46031.1 | SAMN02745194_01213 | SAMN02745194_02621 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | 0.776 |
| SHI83760.1 | SHJ64875.1 | SAMN02745194_01213 | SAMN02745194_03052 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.629 |
| SHI83760.1 | SHJ71198.1 | SAMN02745194_01213 | SAMN02745194_03197 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.406 |
| SHI83760.1 | SHJ84505.1 | SAMN02745194_01213 | SAMN02745194_03525 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hpt domain-containing protein. | 0.926 |
| SHI83760.1 | SHJ92264.1 | SAMN02745194_01213 | SAMN02745194_03735 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, NtrC family, response regulator. | 0.829 |
| SHI83760.1 | SHK01570.1 | SAMN02745194_01213 | SAMN02745194_03973 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.763 |
| SHI83760.1 | SHK06373.1 | SAMN02745194_01213 | SAMN02745194_04081 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.728 |
| SHJ46031.1 | SHI83760.1 | SAMN02745194_02621 | SAMN02745194_01213 | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.776 |
| SHJ46031.1 | SHJ64875.1 | SAMN02745194_02621 | SAMN02745194_03052 | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | Signal transduction histidine kinase. | 0.872 |
| SHJ46031.1 | SHJ71198.1 | SAMN02745194_02621 | SAMN02745194_03197 | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.873 |
| SHJ46031.1 | SHJ84505.1 | SAMN02745194_02621 | SAMN02745194_03525 | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | Hpt domain-containing protein. | 0.960 |
| SHJ46031.1 | SHJ92264.1 | SAMN02745194_02621 | SAMN02745194_03735 | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | Two-component system, NtrC family, response regulator. | 0.858 |
| SHJ46031.1 | SHK01570.1 | SAMN02745194_02621 | SAMN02745194_03973 | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | PAS domain S-box-containing protein. | 0.949 |
| SHJ46031.1 | SHK06373.1 | SAMN02745194_02621 | SAMN02745194_04081 | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | PAS domain S-box-containing protein. | 0.932 |
| SHJ64875.1 | SHI83760.1 | SAMN02745194_03052 | SAMN02745194_01213 | Signal transduction histidine kinase. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.629 |
| SHJ64875.1 | SHJ46031.1 | SAMN02745194_03052 | SAMN02745194_02621 | Signal transduction histidine kinase. | Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. | 0.872 |
| SHJ64875.1 | SHJ71198.1 | SAMN02745194_03052 | SAMN02745194_03197 | Signal transduction histidine kinase. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.997 |
| SHJ64875.1 | SHJ84505.1 | SAMN02745194_03052 | SAMN02745194_03525 | Signal transduction histidine kinase. | Hpt domain-containing protein. | 0.999 |
| SHJ64875.1 | SHJ92239.1 | SAMN02745194_03052 | SAMN02745194_03734 | Signal transduction histidine kinase. | Putative PEP-CTERM system TPR-repeat lipoprotein. | 0.937 |
| SHJ64875.1 | SHJ92264.1 | SAMN02745194_03052 | SAMN02745194_03735 | Signal transduction histidine kinase. | Two-component system, NtrC family, response regulator. | 0.861 |
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