STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK01901.1Glycosyl transferase family 2. (319 aa)    
Predicted Functional Partners:
SHK01926.1
Glycosyl transferase family 2.
 
 
0.895
SHK01844.1
UDP-glucose 4-epimerase.
 
 
 0.884
SHK01817.1
Glycosyltransferase, GT2 family.
 
  0.866
SHK01875.1
Glycosyltransferase Family 4.
 
 
  0.824
SHK02157.1
Glycosyl transferases group 1.
 
 
 0.752
SHK01940.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
 
 0.665
SHK01994.1
Nucleoside-diphosphate-sugar epimerase.
  
 
 0.591
SHK02247.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.583
SHJ92316.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.574
SHK02269.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.564
Your Current Organism:
Roseomonas rosea
NCBI taxonomy Id: 198092
Other names: CIP 107419, DSM 14916, Muricoccus roseus, Muricoccus roseus Kampfer et al. 2003, R. rosea, Roseomonas rosea (Kampfer et al. 2003) Sanchez-Porro et al. 2009, strain 173-96, strain 173/96
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.