STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK03640.1Uncharacterized protein, RmlC-like cupin domain. (178 aa)    
Predicted Functional Partners:
SHK03697.1
Alkanesulfonate monooxygenase.
 
     0.647
SHK03610.1
Lrp/AsnC family transcriptional regulator.
       0.639
SHK03668.1
Sulfonate transport system substrate-binding protein.
       0.596
SHI81477.1
Catalase.
  
  
  0.567
SHJ74679.1
Aminocarboxymuconate-semialdehyde decarboxylase.
 
  
  0.543
SHJ30250.1
SnoaL-like domain-containing protein.
 
  
  0.510
ssuB
Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
       0.501
SHK03756.1
Sulfonate transport system permease protein.
       0.501
SHK03577.1
Protein of unknown function.
       0.491
SHI68218.1
Hypothetical protein.
    
  0.438
Your Current Organism:
Roseomonas rosea
NCBI taxonomy Id: 198092
Other names: CIP 107419, DSM 14916, Muricoccus roseus, Muricoccus roseus Kampfer et al. 2003, R. rosea, Roseomonas rosea (Kampfer et al. 2003) Sanchez-Porro et al. 2009, strain 173-96, strain 173/96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.