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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcdRGcdR; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
gcdH
GcdH.
  
  
 0.760
AKU10936.1
Regulatory helix-turn-helix protein; LysR family protein 204; Belongs to the LysR transcriptional regulatory family.
  
     0.643
AKU11068.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.632
AKU10263.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.605
AKU11026.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.581
AKU11120.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.579
AKU10254.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.527
AKU12844.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.449
AKU14102.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.425
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.