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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU09947.1Hypothetical protein. (341 aa)    
Predicted Functional Partners:
AKU14057.1
Type IV fimbrial biogenesis protein.
 
 
 
 0.927
AKU14059.1
Fimbrial type-IV assembly protein PilO.
 
 
   0.897
AKU14060.1
Type IV fimbrial biogenesis protein.
  
 
   0.896
AKU14061.1
Type IV fimbrial biogenesis protein.
  
 
   0.894
AKU14058.1
Type IV fimbrial biogenesis protein.
 
 
   0.857
AKU14545.1
Putative tail sheath protein.
  
 
 0.842
AKU14554.1
GPW/gp25 family protein.
  
   0.832
AKU09946.1
SMF protein, Rossmann fold nucleotide-binding protein involved in DNA uptake.
       0.821
smg
Hypothetical protein; Belongs to the Smg family.
 
     0.807
AKU14555.1
Hypothetical protein.
  
 
 0.783
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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