Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU09947.1Hypothetical protein. (341 aa)    
Predicted Functional Partners:
AKU14057.1
Type IV fimbrial biogenesis protein.
 
 
 
 0.942
AKU14059.1
Fimbrial type-IV assembly protein PilO.
 
   0.907
AKU14060.1
Type IV fimbrial biogenesis protein.
  
 
   0.902
AKU14061.1
Type IV fimbrial biogenesis protein.
  
 
   0.900
AKU14545.1
Putative tail sheath protein.
  
 
 0.884
AKU14554.1
GPW/gp25 family protein.
  
 
 0.870
AKU14555.1
Hypothetical protein.
  
 
 0.829
AKU14556.1
Hypothetical protein.
  
 
 0.829
AKU14558.1
Hypothetical protein.
  
 
 0.827
AKU09946.1
SMF protein, Rossmann fold nucleotide-binding protein involved in DNA uptake.
       0.813
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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