Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU09961.1TorD family cytoplasmic chaperone. (87 aa)    
Predicted Functional Partners:
AKU09962.1
TorD family cytoplasmic chaperone.
      0.906
AKU09960.1
Putative iron-sulfur binding protein.
       0.773
AKU09963.1
Conserved hypothetical secreted protein.
       0.608
AKU09964.1
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.581
AKU09965.1
Formate dehydrogenase iron-sulfur subunit.
       0.548
AKU09966.1
Hypothetical protein.
       0.548
AKU09967.1
Putative formate dehydrogenase, gamma subunit.
       0.538
AKU09958.1
Hypothetical protein.
       0.424
AKU09959.1
Hypothetical protein.
       0.424
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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