Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU09969.1Metal dependent phosphohydrolase. (416 aa)    
Predicted Functional Partners:
AKU11216.1
Hypothetical protein.
 
  
 0.788
AKU12862.1
Hypothetical protein.
  
     0.772
AKU10030.1
Response regulator.
 
  
 0.702
AKU12613.1
Metal dependent phosphohydrolase/3,5-cyclic-nucleotide phosphodiesterase.
 
  
 0.694
AKU12240.1
Complex sensory protein.
 
 
 0.505
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
       0.486
AKU11984.1
Diguanylate cyclase; Contains PAS/PAC and GAF sensors.
 
 
 0.473
AKU10886.1
Diguanylate cyclase.
 
 
 0.468
AKU10422.1
Hypothetical protein.
 
 
 0.459
AKU12542.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.441
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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