Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU09996.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
AKU09995.1
Hypothetical protein.
       0.750
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
       0.588
AKU09998.1
Hypothetical protein.
       0.587
AKU13205.1
Putative iron-sulfur protein.
  
     0.584
AKU10390.1
Putative transmembrane protein.
  
     0.539
AKU10797.1
Protein AZOSEA05410; Belongs to the UPF0307 family.
  
     0.509
AKU11929.1
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
     0.467
AKU14188.1
Hypothetical protein.
  
     0.461
AKU09999.1
Phosphate regulon transcriptional regulatory protein.
  
    0.429
AKU11922.1
Major facilitator superfamily MFS_1.
  
     0.416
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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