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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10015.1Aminotransferase class-IV. (285 aa)    
Predicted Functional Partners:
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.933
AKU10222.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.925
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.924
AKU10670.1
Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 0.924
ddl
D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.912
dadA
FAD dependent oxidoreductase family protein; Oxidative deamination of D-amino acids.
    
 0.906
dadA-2
D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids.
    
 0.906
AKU10676.1
Aromatic amino acid aminotransferase.
     
 0.906
AKU12707.1
Aromatic amino acid aminotransferase.
     
 0.906
AKU10973.1
D-lysine 5,6-aminomutase, alpha subunit.
  
 
  0.905
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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