trmA protein (Azoarcus sp. CIB) - STRING interaction network

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trmA

tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA). (367 aa)

Predicted Functional Partners:

AKU11493.1

0.593

AKU12822.1

0.580

dusC

0.580

AKU10048.1

0.488

AKU13509.1

0.466

AKU13745.1

0.455

trmB

0.453

rsmA

0.438

guaA

0.436

AKU11444.1

0.420

Your Current Organism:

Azoarcus sp. CIB

NCBI taxonomy Id: 198107
Other names: A. sp. CIB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU10048.1	trmA	AzCIB_0143	AzCIB_0144	Hypothetical protein.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.488
AKU11444.1	rsmA	AzCIB_1543	AzCIB_0808	Putative kinase.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.709
AKU11444.1	trmA	AzCIB_1543	AzCIB_0144	Putative kinase.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.420
AKU11493.1	trmA	AzCIB_1592	AzCIB_0144	Hypothetical protein.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.593
AKU12822.1	dusC	AzCIB_2929	AzCIB_2930	S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.	Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	0.883
AKU12822.1	guaA	AzCIB_2929	AzCIB_1821	S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.404
AKU12822.1	rsmA	AzCIB_2929	AzCIB_0808	S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.457
AKU12822.1	trmA	AzCIB_2929	AzCIB_0144	S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.580
AKU13509.1	AKU13745.1	AzCIB_3616	AzCIB_3852	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	Carbonic anhydrase precursor.	0.453
AKU13509.1	guaA	AzCIB_3616	AzCIB_1821	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.757
AKU13509.1	rsmA	AzCIB_3616	AzCIB_0808	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.829
AKU13509.1	trmA	AzCIB_3616	AzCIB_0144	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.466
AKU13745.1	AKU13509.1	AzCIB_3852	AzCIB_3616	Carbonic anhydrase precursor.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.453
AKU13745.1	trmA	AzCIB_3852	AzCIB_0144	Carbonic anhydrase precursor.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.455
dusC	AKU12822.1	AzCIB_2930	AzCIB_2929	Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.	0.883
dusC	guaA	AzCIB_2930	AzCIB_1821	Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.547
dusC	trmA	AzCIB_2930	AzCIB_0144	Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.580
dusC	trmB	AzCIB_2930	AzCIB_4393	Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	tRNA (guanine-N(7))-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.428
guaA	AKU12822.1	AzCIB_1821	AzCIB_2929	GMP synthase; Catalyzes the synthesis of GMP from XMP.	S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.	0.404
guaA	AKU13509.1	AzCIB_1821	AzCIB_3616	GMP synthase; Catalyzes the synthesis of GMP from XMP.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.757

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