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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10055.1Hypothetical protein. (370 aa)    
Predicted Functional Partners:
AKU13893.1
Hypothetical protein.
  
     0.741
AKU13894.1
Transcriptional regulator, LysR family.
  
     0.729
AKU10927.1
Hypothetical protein.
  
     0.534
AKU14415.1
Cox2 cytochrome oxidase subunit 2.
  
     0.528
AKU14021.1
Hypothetical protein.
  
    0.525
AKU13586.1
Hypothetical protein.
  
     0.508
AKU10035.1
DNA-cytosine methyltransferase.
   
    0.499
AKU13553.1
Heparinase II/III.
  
     0.499
AKU14170.1
Hypothetical protein.
 
     0.472
AKU11708.1
Hypothetical protein.
  
     0.467
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.