Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU10057.1Type I secretion system ATPase. (571 aa)    
Predicted Functional Partners:
AKU10056.1
Type I secretion membrane fusion protein, HlyD family.
 
  
 0.960
AKU10058.1
Hypothetical protein.
 
 
 0.851
AKU10059.1
Hypothetical protein.
 
 
 0.785
AKU11863.1
Hypothetical protein.
 
 
 0.752
AKU10643.1
Hypothetical protein.
 
 
 0.713
AKU13380.1
Hypothetical protein.
 
 
 0.711
AKU12849.1
ABC efflux transporter, permease/ATP-binding protein.
  
  
 
0.704
AKU13732.1
ABC subunit of A-band LPS efflux transporter.
 
  
 0.658
AKU13807.1
ABC transporter ATP-binding/permease.
     
  0.657
AKU12608.1
Fusion of ABC transporter-type transmembrane and ATP binding protein.
     
 0.636
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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