Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10058.1Hypothetical protein. (523 aa)    
Predicted Functional Partners:
AKU10056.1
Type I secretion membrane fusion protein, HlyD family.
 
  
 0.887
AKU10057.1
Type I secretion system ATPase.
 
 
 0.851
AKU10059.1
Hypothetical protein.
 
 
0.739
AKU10324.1
Outer membrane adhesin like protein.
 
 
0.666
AKU11863.1
Hypothetical protein.
 
 
0.666
AKU11852.1
Hypothetical protein.
 
 
0.663
AKU14527.1
Hypothetical protein.
 
0.662
AKU13380.1
Hypothetical protein.
 
 
0.648
AKU10643.1
Hypothetical protein.
 
 
0.641
AKU14089.1
Putative transmembrane sensor protein.
 
 0.623
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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