STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10069.1Type II secretion system protein F. (396 aa)    
Predicted Functional Partners:
AKU10070.1
Type II secretory pathway, pseudopilin PulG.
 
  
 0.930
AKU12246.1
Type II secretion system protein E.
 
 
 0.928
AKU13640.1
Type II secretion system protein E.
 
 
 0.926
AKU10083.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.920
AKU13244.1
Type II secretion system protein E.
 
 
 0.920
AKU13531.1
Type IV fimbrial biogenesis protein.
 
 
 0.919
AKU13245.1
Type II secretion system protein.
  
  
 
0.904
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.866
AKU13791.1
Twitching mobility protein.
 
  
 0.802
AKU12654.1
Hypothetical protein.
 
   
 0.780
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.