STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10075.1Putative lipoprotein. (321 aa)    
Predicted Functional Partners:
AKU13965.1
Hypothetical protein.
  
  
 0.890
AKU11803.1
Hypothetical protein.
  
  
 0.836
AKU11227.1
Hypothetical protein.
  
  
 0.779
AKU14605.1
Porin Gram-negative type.
  
 
 0.766
AKU14215.1
Hypothetical protein.
  
     0.753
AKU12600.1
Hypothetical protein.
  
     0.749
AKU10215.1
Hypothetical protein.
  
     0.742
AKU11013.1
Hypothetical protein.
  
     0.742
AKU10657.1
Hypothetical protein.
 
  
 0.738
AKU13591.1
Outer membrane porin.
  
 
 0.736
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.