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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10076.1Hypothetical protein. (1946 aa)    
Predicted Functional Partners:
AKU10077.1
YVTN family beta-propeller repeat protein.
 
     0.863
AKU10080.1
ABC-type branched-chain amino acid transport system, periplasmic component.
 
  
 0.843
AKU10079.1
Electron transport protein SCO1/SenC.
 
   
 0.819
AKU10067.1
Signal transduction histidine kinase.
 
 
 0.808
AKU10081.1
SurA-like protein.
 
     0.798
AKU10078.1
Uncharacterized protein SCO1/SenC/PrrC.
 
   
 0.785
AKU10084.1
Hypothetical protein.
 
     0.782
AKU10086.1
General secretion pathway protein M.
 
     0.778
AKU10085.1
Hypothetical protein.
 
     0.773
AKU10410.1
Lipopolysaccharide core biosynthesis protein.
  
     0.771
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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