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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10080.1ABC-type branched-chain amino acid transport system, periplasmic component. (516 aa)    
Predicted Functional Partners:
AKU10079.1
Electron transport protein SCO1/SenC.
 
   
 0.907
AKU10078.1
Uncharacterized protein SCO1/SenC/PrrC.
 
   
 0.892
AKU10077.1
YVTN family beta-propeller repeat protein.
 
  
 0.857
AKU10081.1
SurA-like protein.
 
     0.844
AKU10076.1
Hypothetical protein.
 
  
 0.843
AKU10084.1
Hypothetical protein.
 
     0.766
AKU10086.1
General secretion pathway protein M.
 
     0.766
AKU10410.1
Lipopolysaccharide core biosynthesis protein.
  
     0.744
AKU10085.1
Hypothetical protein.
 
     0.728
AKU10251.1
Putative branched-chain amino acid transport system protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.690
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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