Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10081.1SurA-like protein. (239 aa)    
Predicted Functional Partners:
AKU10080.1
ABC-type branched-chain amino acid transport system, periplasmic component.
 
     0.844
AKU10076.1
Hypothetical protein.
 
     0.798
AKU10077.1
YVTN family beta-propeller repeat protein.
 
     0.795
AKU10084.1
Hypothetical protein.
 
     0.780
AKU10085.1
Hypothetical protein.
 
     0.767
AKU11227.1
Hypothetical protein.
  
     0.767
AKU10086.1
General secretion pathway protein M.
 
     0.755
AKU10410.1
Lipopolysaccharide core biosynthesis protein.
  
     0.754
AKU09933.1
Hypothetical protein.
  
     0.749
AKU14215.1
Hypothetical protein.
  
     0.747
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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