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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10084.1Hypothetical protein. (265 aa)    
Predicted Functional Partners:
AKU10085.1
Hypothetical protein.
 
    0.952
AKU10086.1
General secretion pathway protein M.
 
     0.952
AKU10087.1
Hypothetical protein.
 
     0.951
AKU10088.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
     0.950
AKU10089.1
Hypothetical protein.
 
     0.950
AKU10083.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
     0.839
AKU13240.1
Hypothetical protein.
 
     0.792
AKU13236.1
Hypothetical protein.
 
     0.785
AKU10076.1
Hypothetical protein.
 
     0.782
AKU10081.1
SurA-like protein.
 
     0.780
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.