Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10086.1General secretion pathway protein M. (182 aa)    
Predicted Functional Partners:
AKU10088.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
 
 0.972
AKU10084.1
Hypothetical protein.
 
     0.952
AKU10089.1
Hypothetical protein.
 
  
 0.951
AKU10085.1
Hypothetical protein.
 
    0.950
AKU10087.1
Hypothetical protein.
 
     0.949
AKU14060.1
Type IV fimbrial biogenesis protein.
  
 
 0.891
AKU10083.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.889
AKU13239.1
General secretion pathway protein D.
 
 
 0.865
AKU13236.1
Hypothetical protein.
 
  
 0.788
AKU13238.1
General secretion pathway gspG related transmembrane protein.
 
  
 0.786
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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