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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10089.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
AKU10086.1
General secretion pathway protein M.
 
  
 0.951
AKU10084.1
Hypothetical protein.
 
     0.950
AKU10088.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
   
 0.950
AKU10087.1
Hypothetical protein.
 
     0.948
AKU10085.1
Hypothetical protein.
 
     0.946
AKU10083.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.923
AKU13238.1
General secretion pathway gspG related transmembrane protein.
 
     0.792
AKU13237.1
General secretion pathway protein G.
 
     0.786
AKU13239.1
General secretion pathway protein D.
 
   
 0.786
AKU13240.1
Hypothetical protein.
 
     0.781
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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