Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10090.1L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (407 aa)    
Predicted Functional Partners:
gcdH
GcdH.
 
 0.934
AKU12810.1
CAIB/BAIF family protein; Belongs to the CoA-transferase III family.
  
  
 
0.901
AKU11758.1
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
     
 0.900
AKU12273.1
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
  
 
0.900
AKU12556.1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.900
AKU10091.1
Hypothetical protein.
       0.773
AKU10092.1
Proton symporter protein.
     
 0.565
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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