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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10094.1Two-component response regulator, C4-dicarboxylate transport regulator. (449 aa)    
Predicted Functional Partners:
AKU10093.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase.
 0.991
AKU14154.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.778
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
  
 
 0.615
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
 
 0.615
AKU13282.1
Two-component system, NtrC family, C5-dicarboxylate transport sensor histidine kinase.
 
 0.614
AKU12236.1
CheA signal transduction histidine kinase.
  
 
 0.538
AKU10481.1
Nitrogen assimilation sensor kinase.
 
 0.515
AKU13667.1
Hypothetical protein.
 
 
 0.505
flhA
Putative flagellar export pore protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.491
AKU10873.1
Flagellar motor switch protein.
  
  
 0.490
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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