Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10185.1Hypothetical protein. (526 aa)    
Predicted Functional Partners:
AKU10184.1
Hypothetical protein.
 
 
 
0.825
AKU10187.1
Glycosyltransferase family protein.
 
 
 
 0.822
AKU13297.1
Hypothetical protein.
 
 0.737
AKU09973.1
Hypothetical protein.
 
 0.713
AKU14089.1
Putative transmembrane sensor protein.
 
 
 
 0.694
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
 0.663
AKU12765.1
WD-40 repeat protein.
  
 0.662
AKU13305.1
Hypothetical protein.
 
 0.648
AKU10280.1
PASTA-related domain-containing protein.
 
 0.633
AKU10226.1
Hypothetical protein.
    
 0.627
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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