Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10200.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AKU10198.1
Hypothetical protein.
 
   
 0.957
AKU10201.1
Hypothetical protein.
 
  
 0.956
AKU10197.1
Hypothetical protein.
 
   
 0.955
AKU10199.1
Hypothetical protein.
 
    0.952
AKU10202.1
MoxR-like ATPase.
 
  
 0.907
AKU11089.1
Hypothetical protein.
  
     0.571
AKU10194.1
Hypothetical protein.
  
    0.490
AKU10196.1
Hypothetical protein.
  
    0.462
AKU10203.1
Hypothetical protein.
       0.453
AKU10204.1
Glycosyltransferase family protein.
       0.453
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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