Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10212.1Hypothetical protein. (868 aa)    
Predicted Functional Partners:
AKU10211.1
Hypothetical protein.
 
  
 0.916
AKU10171.1
Hypothetical protein.
 
  
 0.774
AKU10356.1
Cytochrome c family protein.
 
 
 0.774
AKU10118.1
Hypothetical protein.
  
     0.773
AKU09933.1
Hypothetical protein.
  
   
 0.768
AKU10116.1
Hypothetical protein.
 
   
 0.767
AKU13965.1
Hypothetical protein.
 
  
 0.762
AKU10172.1
Hypothetical protein.
 
     0.757
AKU12601.1
Hypothetical protein.
  
     0.757
AKU12600.1
Hypothetical protein.
  
     0.756
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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