Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10227.1Hypothetical protein. (378 aa)    
Predicted Functional Partners:
AKU12041.1
Hypothetical protein.
  
 
 0.730
AKU13801.1
Hypothetical protein.
  
 0.726
AKU10075.1
Putative lipoprotein.
  
 
 0.724
AKU10995.1
Cytochrome c, class I.
 
  
 0.723
AKU11662.1
Outer membrane protein OmpW.
  
 
 0.696
AKU10954.1
Quinoprotein ethanol dehydrogenase.
 
  
 0.680
AKU11742.1
Polysaccharide export protein EpsE.
  
  
 0.673
AKU10955.1
Cache sensor protein.
  
    0.665
AKU10994.1
Extracellular solute-binding protein family 3.
 
   
 0.663
AKU10982.1
TonB-dependent receptor.
  
 
 0.657
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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