Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10237.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
AKU11702.1
Putative cyclase.
  
    0.755
AKU10976.1
Hypothetical protein.
  
    0.708
AKU10236.1
Cation diffusion facilitator family transporter.
       0.697
AKU10238.1
PaaZ.
       0.557
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
     
  0.500
purM
Phosphoribosylaminoimidazole synthetase.
     
  0.500
AKU10240.1
3-hydroxyadipyl-CoA dehydrogenase PaaH.
  
    0.413
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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