Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU10247.1Ring-hydroxylation complex protein 4. (360 aa)    
Predicted Functional Partners:
AKU10244.1
phenylacetate-CoA oxygenase subunit PaaB.
 
 
 0.998
AKU10243.1
PaaA.
 
 0.997
AKU10245.1
Putative ring-hydroxylation complex protein 2.
 
 0.997
AKU10246.1
Putative ring oxidation complex protein 3.
 
 
 0.995
AKU10241.1
Putative thioesterase PaaI.
 
 
 0.986
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
  
 0.966
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
  
 0.966
AKU11159.1
2-ketoglutarate NADP oxidoreductase, gamma subunit.
  
 0.947
bzdV
BzdV.
   
 0.926
AKU10239.1
1,2-epoxyphenylacetyl-CoA isomerase PaaG; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.886
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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