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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10280.1PASTA-related domain-containing protein. (607 aa)    
Predicted Functional Partners:
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
   
 0.767
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 0.767
AKU11591.1
Ankyrin.
  
     0.766
AKU11264.1
Hypothetical protein.
  
 0.759
AKU10662.1
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.737
AKU10226.1
Hypothetical protein.
    
 0.730
AKU13297.1
Hypothetical protein.
 
 
 0.726
AKU11595.1
Ankyrin.
  
     0.700
AKU10186.1
Hypothetical protein.
 
 0.690
AKU10462.1
Putative ATP-dependent helicase.
    
 0.678
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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