Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU10283.1Putative signal peptide protein. (94 aa)    
Predicted Functional Partners:
AKU13893.1
Hypothetical protein.
  
     0.552
AKU14415.1
Cox2 cytochrome oxidase subunit 2.
  
     0.518
AKU10281.1
Thiamine S protein.
       0.480
AKU10282.1
BNR repeat-containing glycosyl hydrolase.
       0.480
AKU13894.1
Transcriptional regulator, LysR family.
  
     0.459
AKU11618.1
Hypothetical protein.
  
     0.451
AKU11708.1
Hypothetical protein.
  
     0.441
AKU11707.1
Hypothetical protein.
  
     0.440
AKU10284.1
ferredoxin-NADP+ reductase.
       0.429
AKU14414.1
OrfB.
  
     0.429
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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