Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10286.1Hypothetical protein; Belongs to the Dps family. (155 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.914
AKU13828.1
Putative bacterioferritin; Iron-storage protein.
     
  0.900
AKU14043.1
Pyridoxamine 5-phosphate oxidase family protein.
     
  0.900
AKU13827.1
Bacterioferritin-associated ferredoxin.
  
 
 0.804
AKU14128.1
Hypothetical protein.
   
  
 0.680
AKU12237.1
Methyl-accepting chemotaxis sensory transducer.
  
  
 0.609
AKU10287.1
Universal stress protein.
  
  
 0.544
AKU10288.1
Integral membrane protein, TerC family.
       0.485
AKU12609.1
Putative prolyl cis-trans isomerase.
  
   
 0.479
AKU12136.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
  
 0.474
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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