STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10294.1Lipooligosaccharide transport system ATP-binding protein. (326 aa)    
Predicted Functional Partners:
AKU10293.1
Lipooligosaccharide transport system permease protein.
 
 
 0.995
AKU14322.1
ABC-2 type transporter.
 
 
 0.966
AKU10295.1
Glutathione S transferase.
  
 
 0.804
AKU10296.1
Hypothetical protein.
       0.773
AKU10297.1
Fe2-S2-type ferredoxin.
       0.773
AKU12088.1
Putative ABC-2 type transport system permease protein.
  
 
 0.772
AKU10557.1
ABC-2 type transporter permase, antibiotic transport system permease protein.
 
 0.692
AKU10993.1
ABC-2 type transporter permase, antibiotic transport system permease protein.
 
 
 0.657
AKU14321.1
ABC-2 type transporter.
 
 
 0.619
AKU11612.1
ABC-2 type transporter.
  
 
 0.606
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.