Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10407.1Hypothetical protein. (313 aa)    
Predicted Functional Partners:
AKU10409.1
Lipopolysaccharide core biosynthesis protein.
 
 
 0.957
AKU10408.1
Hypothetical protein.
      0.952
AKU10410.1
Lipopolysaccharide core biosynthesis protein.
 
     0.949
AKU10411.1
Lipopolysaccharide core biosynthesis protein.
 
     0.947
AKU10412.1
Lipopolysaccharide kinase WaaP.
 
     0.947
AKU10413.1
Glucosyltransferase I.
 
     0.947
tsaD
Putative DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.916
AKU10414.1
Heptosyltransferase I.
 
   
 0.902
AKU10406.1
Sulfatase family protein.
 
     0.840
AKU10415.1
ADP-heptose-LPS heptosyltransferase II.
 
   
 0.837
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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