STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10409.1Lipopolysaccharide core biosynthesis protein. (257 aa)    
Predicted Functional Partners:
AKU10411.1
Lipopolysaccharide core biosynthesis protein.
 
 0.968
AKU10412.1
Lipopolysaccharide kinase WaaP.
 
 0.968
AKU10413.1
Glucosyltransferase I.
 
 0.968
AKU10407.1
Hypothetical protein.
 
 
 0.957
AKU10410.1
Lipopolysaccharide core biosynthesis protein.
 
     0.952
AKU10414.1
Heptosyltransferase I.
 
 
 0.923
AKU10226.1
Hypothetical protein.
    
 0.893
AKU10415.1
ADP-heptose-LPS heptosyltransferase II.
 
 
 0.881
AKU10406.1
Sulfatase family protein.
 
   
 0.851
AKU11264.1
Hypothetical protein.
   
 0.835
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.