Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKU10411.1Lipopolysaccharide core biosynthesis protein. (88 aa)    
Predicted Functional Partners:
AKU10412.1
Lipopolysaccharide kinase WaaP.
     0.990
AKU10409.1
Lipopolysaccharide core biosynthesis protein.
 
 0.968
AKU10407.1
Hypothetical protein.
 
     0.947
AKU10410.1
Lipopolysaccharide core biosynthesis protein.
 
     0.946
AKU10413.1
Glucosyltransferase I.
 
     0.946
AKU10414.1
Heptosyltransferase I.
 
  
 0.912
AKU10415.1
ADP-heptose-LPS heptosyltransferase II.
 
  
 0.849
AKU10406.1
Sulfatase family protein.
 
   
 0.803
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
  
  
 0.790
AKU10417.1
Hypothetical protein.
 
   
 0.787
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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