Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU10424.1TonB-dependent receptor. (632 aa)    
Predicted Functional Partners:
AKU13829.1
Hypothetical protein.
 
 
 
 0.821
AKU12979.1
C-terminal TonB domain conaining protein.
 
 
 
 0.810
AKU10425.1
Transmembrane ABC transporter protein,permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
 0.793
AKU13591.1
Outer membrane porin.
    
 0.763
AKU14605.1
Porin Gram-negative type.
    
 0.763
AKU13769.1
Putative TonB family protein.
 
 
 
 0.753
AKU12627.1
Porin.
    
 0.743
AKU13592.1
Porin Gram-negative type.
    
 0.743
AKU13589.1
Polysaccharide export protein.
  
  
 0.696
AKU13516.1
Outer membrane protein.
  
  
 0.688
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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