Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10453.1ABC transporter, ATP-binding protein. (230 aa)    
Predicted Functional Partners:
AKU10451.1
Putative ABC transporter protein.
 
 0.994
AKU10452.1
Putative ABC transporter protein.
 
 0.992
AKU10454.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.932
AKU13832.1
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.736
AKU11917.1
Hypothetical protein.
  
 0.733
AKU14488.1
ABC transporter, permease protein.
  
 0.733
AKU11899.1
Hypothetical protein.
  
 0.728
AKU12538.1
Hypothetical protein.
  
 0.726
AKU14153.1
ATP-binding ABC transporter protein.
 
  
 
0.667
AKU13811.1
ABC transporter, permease protein.
  
 
 0.652
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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