Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10497.1Hypothetical protein. (548 aa)    
Predicted Functional Partners:
AKU10495.1
Cellobiose phosphorylase.
 
  
 0.914
AKU10498.1
Hypothetical protein.
 
  
 0.875
AKU10496.1
Glycosyltransferase family protein.
 
  
 0.865
AKU12527.1
Putative beta (1-6) glucan synthase.
  
     0.715
AKU10326.1
Hypothetical protein.
  
     0.711
AKU10499.1
Pseudouridine synthase A.
       0.676
AKU12528.1
Putative beta (1-3) glucosyl transferase.
 
  
 0.655
AKU10384.1
Hypothetical protein.
  
     0.612
AKU10113.1
Transglutaminase domain-containing protein.
 
     0.536
AKU13437.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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