Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU10523.1Hemerythrin-like metal-binding domain-containing protein. (161 aa)    
Predicted Functional Partners:
AKU10522.1
Thioesterase superfamily protein.
       0.485
AKU14476.1
Methyl-accepting chemotaxis sensory transducer.
 
    0.474
AKU11949.1
Flavodoxin protein.
  
  
 0.467
AKU14484.1
Methyl-accepting chemotaxis sensory transducer with Cache sensor.
    0.458
AKU10524.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
       0.455
AKU10894.1
Methyl-accepting chemotaxis sensory transducer with Cache sensor.
 
    0.445
AKU12239.1
Chemotaxis protein CheR.
 
    0.425
AKU14252.1
Methyl-accepting chemotaxis sensory transducer.
 
    0.420
AKU13779.1
Twitching motility transmembrane protein.
  
    0.415
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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