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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10543.1Twitching mobility protein. (403 aa)    
Predicted Functional Partners:
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.793
AKU13532.1
Type IV fimbrial biogenesis protein.
 
   
 0.792
AKU13533.1
Type IV fimbrial biogenesis protein, pilC.
 
   
 0.791
AKU13245.1
Type II secretion system protein.
 
   
 0.778
AKU14061.1
Type IV fimbrial biogenesis protein.
  
  
 0.773
AKU10069.1
Type II secretion system protein F.
 
   
 0.772
AKU14218.1
Hypothetical protein.
  
   
 0.629
AKU14057.1
Type IV fimbrial biogenesis protein.
  
   
 0.618
AKU14059.1
Fimbrial type-IV assembly protein PilO.
 
  
 0.529
AKU10542.1
Hypothetical protein.
       0.504
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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