Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU10550.1ATP-binding ABC transporter protein. (272 aa)    
Predicted Functional Partners:
AKU10551.1
Putative ABC transport system permease protein, organic solvent resistance ABC transporter permease.
 
 0.998
AKU10552.1
Putative signal peptide protein, toluene tolerance Ttg2C-like.
 
 0.998
AKU10555.1
NTP-binding protein.
  
 0.979
AKU12146.1
Hypothetical protein.
 
 0.979
AKU11909.1
Putative ABC transporter permease.
 
 0.976
AKU11942.1
ABC transporter, permease protein.
 
 0.976
AKU10554.1
Putative toluene tolerance protein.
 
 
 0.945
AKU11907.1
Hypothetical protein.
  
 0.934
AKU11940.1
Periplasmic component of ABC-type transport system.
  
 0.934
AKU12148.1
Hypothetical protein.
  
 0.934
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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