Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10574.1Hypothetical protein. (248 aa)    
Predicted Functional Partners:
AKU10573.1
Putative HTRA-like serine protease; Belongs to the peptidase S1C family.
  
    0.647
AKU10168.1
Hypothetical protein.
   
    0.607
AKU10208.1
Hypothetical protein.
   
    0.607
AKU14069.1
dTDP-D-glucose 4, 6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.594
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
  
 0.543
AKU11913.1
Aminoacyl-histidine dipeptidase.
  
    0.507
AKU09913.1
Transcriptional regulator, GntR family.
  
    0.424
AKU10129.1
Transcriptional regulator, GntR family.
   
    0.414
AKU10289.1
GntR family transcriptional regulator.
   
    0.414
AKU11858.1
Putative aminotransferase.
   
    0.414
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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