Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10589.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
AKU10590.1
RseC, Positive regulator of sigma E activity.
       0.750
AKU10810.1
Hypothetical protein.
  
     0.650
AKU10588.1
FdxN protein.
       0.641
AKU14046.1
Hypothetical protein.
  
     0.607
AKU10931.1
Hypothetical protein.
  
     0.574
AKU14216.1
Hypothetical protein.
  
     0.551
AKU11657.1
Hypothetical protein.
  
     0.545
AKU13395.1
Hypothetical protein.
  
     0.526
AKU11803.1
Hypothetical protein.
  
     0.518
AKU10276.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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