Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10593.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
AKU10594.1
Hypothetical protein.
 
  
 0.952
AKU10595.1
Nitrogen fixation protein.
 
    0.947
AKU10596.1
Nitrogenase molybdenum-iron cofactor biosynthesis protein; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.930
AKU10592.1
Nif-specific ferredoxin III protein.
 
    0.926
AKU10591.1
Putative NifQ protein.
 
    0.883
nifW
Nitrogen fixation protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.829
AKU10598.1
Nitrogenase molybdenum-iron cofactor biosynthesis protein.
 
    0.817
AKU10615.1
Nitrogen fixation protein.
 
  
 0.796
AKU10616.1
Iron-sulfur cofactor synthesis protein.
 
    0.787
AKU10612.1
Hypothetical protein.
  
    0.770
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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